- Shakopee
- Springsteel Island
- Shelly
- Sherburn
- Shevlin
- Shoreview
- Silver Bay
- Slayton
- Sleepy Eye
- Sobieski
- Solway
- South Saint Paul
- Spicer
- Spring Lake Park
- Spring Park
- Squaw Lake
- Stacy
- Staples
- Steen
- Stephen
- Stewart
- Stewartville
- Saint Clair Junction
- Saint Marys Island
- Saint Paul Church
- Saint Paul Island
- Salo Corner
- Sand Bay Island
- Sandbar Island
- Sax